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Barley1 22k Microarray Sequence ID: Barley1_X65526
Sequence ID: You may enter either an Affymetrix probe set ID or a Barley1 consensus ID
Sequence Type Exemplar sequence
Probe Set Details Probe Sequences & Alignment
Probe sets for Barley1_X65526:

Expression details for X65526.1_at
GENE EXPRESSION VARIATION IN EXPERIMENTS for X65526.1_at
Alignments and Assemblies • Barley1 GeneChip Assembly • Barley1 GeneChip Assembly 25 contig and alignment • PlantGDB PUT assemblies • GrainGenes Blast • HarvEST: Barley 21 Assembly • HarvEST: Barley 25 Assembly • HarvEST BLAST • PLEXdb Blast • TAIR Blast
Model Genome Alignments • Rice Alignment at Gramene (by locus name): No hits

• Brachypodium distachyon Alignment at Brachybase: No hits
Probe Set Annotation Affymetrix annotation, 2009-03-11
NPXYNAMR N.patriciarum mRNA for xylanase A
Annotation via Blast • BLASTX UniProt: No hits

• BLASTN TIGR Plant Transcript Assemblies: No hits

• BLASTX NCBI Reference Sequence: No hits

• BLASTX MSU Rice genome: No hits

• BLASTN DFCI Hordeum vulgare Gene Index: No hits

• BLASTX Brachypodium distachyon genome: No hits

• BLASTX Arabidopsis thaliana genome: No hits

Barley1 exemplars are kindly provided by Dr. Timothy Close from HarvEST:Barley. The BLASTs in this section are based on contig assembly #25.
Additional Annotations 2004-03-01 Roger Wise Lab
NPXYNAMR N.patriciarum mRNA for xylanase A [Neocallimastix patriciarum]
Sequence
Can not find consensus sequence for Barley1_X65526.
 
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